feat: stalign api and landmark alignment - #1195
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timtreis
reviewed
Jun 23, 2026
| import numpy.typing as npt | ||
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| from squidpy._utils import NDArrayA | ||
| from squidpy.experimental.methods.registry import ALIGN_LANDMARKS |
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Why are we using a registry here? It's unlikely this will get extended upon much and it introduces complexity
timtreis
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Jun 23, 2026
| query: np.ndarray, | ||
| *, | ||
| method: str, | ||
| solve_fn: Callable[[np.ndarray, np.ndarray], np.ndarray], |
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Shouldn't it be Callable[np.ndarray, np.ndarray]?
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Conflict in src/squidpy/experimental/tl/__init__.py: kept the branch's align/AlignResult exports and folded in upstream's make_stitched_labels, which moved from experimental.im to experimental.tl in scverse#1254.
This was referenced Aug 11, 2026
selmanozleyen
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Continuation of #1162