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@openworm

OpenWorm

An open-source project dedicated to creating a virtual C. elegans nematode in a computer.
README.md

OpenWorm

An open-source project dedicated to creating a virtual C. elegans nematode in a computer.

An overview of the core repositories in the project, along with the current status of automated testing, can be found here.

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  1. OpenWorm OpenWorm Public

    Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues

    Python 3.1k 249

  2. openworm.github.io openworm.github.io Public

    OpenWorm main website

    HTML 30 34

  3. org.geppetto org.geppetto Public

    Geppetto is an open-source platform to build web-based applications to visualize and simulate neuroscience data and models.

    Python 217 50

  4. c302 c302 Public

    The c302 framework for generating multiscale network models of C. elegans

    Python 159 38

  5. ChannelWorm2 ChannelWorm2 Public

    Tools and curated datasets to build quantitative models of C. elegans ion channels

    Jupyter Notebook 12 5

Repositories

Showing 10 of 113 repositories
  • WCONViewer Public

    Python based viewer for WCON files in 2D

    openworm/WCONViewer's past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 24, 2026
  • tracker-commons Public

    Compilation of information and code bases related to open-source trackers for C. elegans

    openworm/tracker-commons's past year of commit activity
    Scala 15 13 28 (2 issues need help) 3 Updated Oct 24, 2026
  • OpenWorm Public

    Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues

    openworm/OpenWorm's past year of commit activity
    Python 3,069 MIT 249 41 1 Updated Oct 24, 2026
  • c302 Public

    The c302 framework for generating multiscale network models of C. elegans

    openworm/c302's past year of commit activity
    Python 159 MIT 38 4 (1 issue needs help) 1 Updated Oct 23, 2026
  • CE_locomotion Public Forked from edizquierdo/CE_locomotion

    Neuromechanical model of locomotion in C. elegans, originally developed by Eduardo Izquerdo, Erick Olivares and Randall Beer

    openworm/CE_locomotion's past year of commit activity
    C++ 4 6 7 3 Updated Oct 23, 2026
  • sibernetic Public

    This is a C++/OpenCL implementation of the PCISPH algorithm supplemented with a set of biomechanics related features applied to C. elegans locomotion

    openworm/sibernetic's past year of commit activity
    C 391 115 33 11 Updated Oct 22, 2026
  • muscle_model Public

    Model of C elegans body wall muscle based on Boyle & Cohen 2008

    openworm/muscle_model's past year of commit activity
    Jupyter Notebook 47 22 14 0 Updated Oct 21, 2026
  • Worm2Dtest Public

    Simulator of 2D worm body models

    openworm/Worm2Dtest's past year of commit activity
    C++ 1 MIT 0 0 0 Updated Oct 14, 2026
  • Worm3DViewer Public

    Test repository for multiple views of the worm in 3D

    openworm/Worm3DViewer's past year of commit activity
    Python 1 0 0 0 Updated Oct 12, 2026
  • JohnsonMailler_MuscleModel Public

    C. elegans muscle model from Johnson & Mailler 2015

    openworm/JohnsonMailler_MuscleModel's past year of commit activity
    HTML 2 1 3 0 Updated Oct 8, 2026
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